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dbiblast

man page of dbiblast

dbiblast: Index a BLAST database

NAME
dbiblast - Index a BLAST database

SYNOPSIS

dbiblast -dbname string -directory directory -filenames string -release string -date string -seqtype list -blastversion list -fields list -exclude string -sortoptions string -maxindex integer -systemsort boolean -cleanup boolean -sourcefile boolean -outfile outfile -indexoutdir outdir dbiblast -help

DESCRIPTION

dbiblast is a command line program from EMBOSS ("the European Molecular Biology Open Software Suite"). It is part of the "Utils:Database indexing" command group(s).

OPTIONS

Input section -dbname string -directory directory Default value: . -filenames string Default value: $(dbname) Required section -release string Default value: 0.0 -date string Default value: 00/00/00 -seqtype list Default value: unknown -blastversion list Default value: unknown Advanced section -fields list Default value: acc -exclude string -sortoptions string Sort options, typically '-T .' to use current directory for work files and '-k 1,1' to force GNU sort to use the first field Default value: -T . -k 1,1 -maxindex integer -systemsort boolean Default value: Y -cleanup boolean Default value: Y -sourcefile boolean Output section -outfile outfile -indexoutdir outdir Default value: .

BUGS

Bugs can be reported to the Debian Bug Tracking system (//bugs.debian.org/emboss), or directly to the EMBOSS developers (//sourceforge.net/tracker/?group_id=93650&atid=605031).
SEE ALSO
dbiblast is fully documented via the tfm(1) system.
AUTHOR
Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> Wrote the script used to autogenerate this manual page.

COPYRIGHT

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself. DBIBLAST(1)
 
 
 

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